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escherichia coli B str. REL606 에서 변이 되지않은 gene 부분이 어디인가요?

escherichia coli B str. REL606 에서 쉽게변이되지않은 gene부분을 선택하여 primer을 제작하여 PCR을 할려고 합니다.

대장균에서 쉽게 변이가 되지않은 gene부분을 무엇인지 잘 몰라서 primer 제작이 어렵습니다.

DNA 염기서열리 너무 큰 대장균이라 어느 부분을 선택해야 할지 결정이 어려워서 이렇게 도움을 요청합니다.

 

 

  • escherichia coli
  • REL606
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    -------------------------------------질문-------------------------------------

    escherichia coli B str. REL606 에서 쉽게변이되지않은 gene부분을 선택하여 primer을 제작하여 PCR을 할려고 합니다.

    대장균에서 쉽게 변이가 되지않은 gene

     

    이런건 어떤가요?
     
    J Bacteriol. 2009 Aug;191(15):4732-49. Epub 2009 Apr 17.

    Conserved network of proteins essential for bacterial viability.

    Source

    Department of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.

    Abstract

    The yjeE, yeaZ, and ygjD genes are highly conserved in the genomes of eubacteria, and ygjD orthologs are also found throughout the Archaea and eukaryotes. In this study, we have constructed conditional expression strains for each of these genes in the model organism Escherichia coli K12. We show that each gene is essential for the viability of E. coli under laboratory growth conditions. Growth of the conditional strains under nonpermissive conditions results in dramatic changes in cell ultrastructure. Deliberate repression of the expression of yeaZ results in cells with highly condensed nucleoids, while repression of yjeE and ygjD expression results in at least a proportion of very enlarged cells with an unusual peripheral distribution of DNA. Each of the three conditional expression strains can be complemented by multicopy clones harboring the rstA gene, which encodes a two-component-system response regulator, strongly suggesting that these proteins are involved in the same essential cellular pathway. The results of bacterial two-hybrid experiments show that YeaZ can interact with both YjeE and YgjD but that YgjD is the preferred interaction partner. The results of in vitro experiments indicate that YeaZ mediates the proteolysis of YgjD, suggesting that YeaZ and YjeE act as regulators to control the activity of this protein. Our results are consistent with these proteins forming a link between DNA metabolism and cell division.부분을 무엇인지 잘 몰라서 primer 제작이 어렵습니다.

    DNA 염기서열리 너무 큰 대장균이라 어느 부분을 선택해야 할지 결정이 어려워서 이렇게 도움을 요청합니다.

     

     

     

    -------------------------------------질문-------------------------------------

    escherichia coli B str. REL606 에서 쉽게변이되지않은 gene부분을 선택하여 primer을 제작하여 PCR을 할려고 합니다.

    대장균에서 쉽게 변이가 되지않은 gene

     

    이런건 어떤가요?
     
    J Bacteriol. 2009 Aug;191(15):4732-49. Epub 2009 Apr 17.

    Conserved network of proteins essential for bacterial viability.

    Source

    Department of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.

    Abstract

    The yjeE, yeaZ, and ygjD genes are highly conserved in the genomes of eubacteria, and ygjD orthologs are also found throughout the Archaea and eukaryotes. In this study, we have constructed conditional expression strains for each of these genes in the model organism Escherichia coli K12. We show that each gene is essential for the viability of E. coli under laboratory growth conditions. Growth of the conditional strains under nonpermissive conditions results in dramatic changes in cell ultrastructure. Deliberate repression of the expression of yeaZ results in cells with highly condensed nucleoids, while repression of yjeE and ygjD expression results in at least a proportion of very enlarged cells with an unusual peripheral distribution of DNA. Each of the three conditional expression strains can be complemented by multicopy clones harboring the rstA gene, which encodes a two-component-system response regulator, strongly suggesting that these proteins are involved in the same essential cellular pathway. The results of bacterial two-hybrid experiments show that YeaZ can interact with both YjeE and YgjD but that YgjD is the preferred interaction partner. The results of in vitro experiments indicate that YeaZ mediates the proteolysis of YgjD, suggesting that YeaZ and YjeE act as regulators to control the activity of this protein. Our results are consistent with these proteins forming a link between DNA metabolism and cell division.부분을 무엇인지 잘 몰라서 primer 제작이 어렵습니다.

    DNA 염기서열리 너무 큰 대장균이라 어느 부분을 선택해야 할지 결정이 어려워서 이렇게 도움을 요청합니다.

     

     

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